Saccharomyces Cerevisiae Study

Validating Hyperbolic Field Effects on a Model Biological Organism

Who We Are?

This research is conducted under patent KZ 2025/1095.1 (Fractal Biomedical System), filed by ASRP LLP (Baikonur, Kazakhstan), and is implemented within the logic of a reproducible interdisciplinary platform — the Fractal Biomedical System of Hyperbolic Fields. A key role is held by Valeria Ovsyannikova — Director of the Biomedical Research Department, co-founder of the holding, and Chief Biomedical Engineer — providing strategic leadership, laboratory protocol development, and direct execution of experimental procedures. Engineering implementation of emitters — with the participation of Aleksandr Ovseannikov. Software is developed at two levels jointly by Valeria Ovsyannikova and Denis Banchenko. Laboratory support — Galina Ovsyannikova, auxiliary tasks — Eva Ovsyannikova. Data processing — AI-driven platform (Kyryl Zmiienko, Mykhailo Kapustin). Scientific publication — Ivan Savelyev.

Our Mission

Our mission is to complete the holistic integration of the physical model, engineering implementation, and biomedical experiment into a unified research structure. All stages of work are oriented towards subsequent scientific publication and independent verification of results. The study protocol is registered on the Open Science Framework: osf.io/Jgt3h. We aim to demonstrate that controlled exposure to a structured physical field causes measurable, reproducible changes in fermentation kinetics, metabolic activity, and temporal organization of biochemical reactions.

Project Goal

The goal is to determine whether controlled exposure to a hyperbolic field causes measurable changes in fermentation kinetics, metabolic activity, and morphology of Saccharomyces cerevisiae. We use a randomized double-blind design, a multi-stage computer vision pipeline (Cellpose3, YeastSAM, AMiGA), and statistical analysis based on linear mixed models (LME). Success criteria — statistically significant differences (p < 0.05) in yeast fermentation and viability across exposure channels with a moderate effect size (d ≥ 0.4).

Research Components

Measurement Protocols:

Primary metrics: fermentation rate, gas production, turbidity changes, time to visible activity onset, qualitative morphology (texture, growth patterns). Derived indices: FAI (AUC ratio), FDI (lag-phase difference), FPI (maximum growth rate ratio).

Methylene blue staining: 100 μl suspension + 100 μl solution (0.1 mg/ml). Incubation 5 min. Dead cells — blue, live — colorless. Budding cells with faint staining counted as live.

Observation schedule: before irradiation, immediately after, at 3h, 6h, 12h, 24h, 48h. At each stage — photography and microscopy. Staining — at 24h and 48h.

Experimental Design:

Randomized controlled experiment with double-blind methodology. Samples are distributed via RNG, researchers are unaware of conditions during analysis. Exposure — 80 minutes per session in a controlled environment: basement (-1 floor), complete darkness, 10°C.

  • 5 groups: Control, CH19, CH21, CH17, CH17+CH19 (5–10 independent samples each, N=25–50)
  • Double-blind: coded sample identifiers, analysts unaware of conditions until processing is complete
  • Automatic logging: 1 measurement per minute, ~80 records per session, Linux system with 1 TB storage

Computer Vision & Data Analysis:

Multi-stage computer vision pipeline for objective assessment of cell viability and dynamics:

  • Cellpose3 — noise reduction and elimination of eyepiece photography artifacts
  • YeastSAM — cell segmentation with 72% accuracy for budding cells
  • AMiGA — growth curve construction via Gaussian processes, non-parametric phase fitting
  • Statistics: linear mixed model (LME), Tukey post-hoc, Kruskal-Wallis test, p < 0.05

Patents & Registration

Fractal Biomedical System

KZ 2025/1095.1

This research is associated with patent KZ 2025/1095.1 (Fractal Biomedical System), currently under substantive examination. All experimental protocols and hypotheses were registered prior to data collection.

OSF: osf.io/vxkum — Research preregistration — 11 hypotheses, CC-BY-NC-ND 4.0 license

Patent documentation and OSF registration

Related Studies

This research is part of the ASRP ecosystem, which includes several independent projects studying the effects of hyperbolic fields:

Related research

Research Gallery

Visual materials from experiments: microscopy, staining, fermentation monitoring, and viability analysis of Saccharomyces cerevisiae cells.

Research Team

This research is conducted under patent KZ 2025/1095.1 (Fractal Biomedical System), filed by ASRP LLP (Baikonur, Kazakhstan).

Valeria Ovseannicova

Valeria Ovseannicova

CBE (Chief Biomedical Engineer), Co-Founder ASRP

Provides strategic and operational leadership, develops and validates laboratory protocols, manages experimental architecture, and directly performs the majority of experimental procedures including irradiation, parameter tuning, and experiment monitoring. Jointly with Denis Banchenko, carries out theoretical and conceptual development of the system, including the physical model of irradiation processes, hyperbolic lens architecture, and field formation principles.

Mykhailo Kapustin

Mykhailo Kapustin

CTO (Chief Technology Officer), Co-Founder ASRP

Design and implementation of computational infrastructure, data pipeline construction, model integration into the analytics environment, and scalability of the data processing system.

Galina Ovseannicova

Galina Ovseannicova

Senior Laboratory Technician

Laboratory support, environment preparation, and protocol stability maintenance.

Ivan Savelyev

Ivan Savelyev

CSO (Chief Scientific Oficer)

Scientific publication preparation, results structuring, and materials formatting for presentation to the scientific and technological community.

Kyryl Zmiienko

Kyryl Zmiienko

SAIE (Senior Artificial Intelligence Engineer)

Development and training of machine learning models, including convolutional neural networks (CNN) for spatial pattern analysis, transformer architectures for uncovering complex dependencies in time series, and hybrid models adapted for biomedical signals.

Denis Banchenko

Denis Banchenko

CEO (Chief Executive Officer), Founder ASRP

Project coordination, OSF registration, workflow management. Jointly with Valeria Ovsyannikova, carries out theoretical and conceptual development of the system, as well as high-level irradiation process control logic development, including irradiation mode formation algorithms and adaptive experiment scenarios.

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